๐จFeatures
Genomic ranges operations
Features | Bioframe | polars-bio | PyRanges | Pybedtools | PyGenomics | GenomicRanges |
---|---|---|---|---|---|---|
overlap | ||||||
nearest | ||||||
cluster | ||||||
merge | ||||||
complement | ||||||
select/slice | ||||||
coverage | ||||||
expand | ||||||
sort |
Input/Output
I/O | Bioframe | polars-bio | PyRanges | Pybedtools | PyGenomics | GenomicRanges |
---|---|---|---|---|---|---|
Pandas DataFrame | ||||||
Polars DataFrame | ||||||
Polars LazyFrame | ||||||
Native readers |